gemmi.cif module

CIF file format

Classes

class Block

class Column

class Ddl

class Document

class Item

class Loop

class Table

class WriteOptions

Enums

class Style: Simple = 0 NoBlankLines = 1 PreferPairs = 2 Pdbx = 3 Indent35 = 4 Aligned = 5

Members:

Functions

def as_int(value: str) -> int

Returns int number from string value.

def as_int(value: str, default: int) -> int

Returns int number from string value or the second arg if null.

def as_number(value: str, default: float = nan) -> float

Returns float number from string

def as_string(value: str) -> str

Get string content (no quotes) from raw string.

def is_null(value: str) -> bool

def quote(string: str) -> str

def quote_list(arg0: list, /) -> typing.List[str]

def read(filename: str) -> Document

Reads normal or gzipped CIF file.

def read_file(filename: str) -> Document

Reads a CIF file copying data into Document.

def read_mmjson(filename: str) -> Document

Reads normal or gzipped mmJSON file.

def read_string(data: str) -> Document

Reads a string as a CIF file.